bioinformatics

Panel of normals
Building a panel of unrelated normals to filter somatic variant calls from artefacts and germline leakage.
Last updated on Nov 28, 2024 6 min read bioinformatics
Amazon for the Integrative Genomics Viewer (IGV)
On expanding the Broad’s Integrative Genomics Viewer (IGV) to read input directly from AWS S3.
Last updated on Sep 22, 2021 7 min read bioinformatics, infrastructure
BWA-MEM vs Minimap2: WGS somatic variant calling
We evaluate differences between bwa-mem and minimap2-aligned reads for somatic variant calling.
Last updated on Nov 28, 2024 5 min read bioinformatics