variant-calling

Panel of normals

Building a panel of unrelated normals to filter somatic variant calls from artefacts and germline leakage.

Last updated on Sep 21, 2021 6 min read bioinformatics

BWA-MEM vs Minimap2: WGS somatic variant calling

We evaluate differences between bwa-mem and minimap2-aligned reads for somatic variant calling.

Last updated on Sep 21, 2021 5 min read bioinformatics